| BIOS 221 |
Modern Statistics for Modern Biology (STATS 256, STATS 366) |
Application based course in nonparametric statistics. Modern toolbox of visualization and statistical methods for the analysis of data, examples drawn from immunology, microbiology, cancer research and ecology. Methods covered include multivariate methods (PCA and extensions), sparse representations (trees, networks, contingency tables) as well as nonparametric testing (Bootstrap, permutation and Monte Carlo methods). Hands on, use R and cover many Bioconductor packages. Prerequisite: Working knowledge of R and two core Biology courses. Note that the 155 offering is a writing intensive course for undergraduates only and requires instructor consent. (WIM). See https://web.stanford.edu/class/bios221/index.html |
Terms: Aut | Units: 3 |
| HUMBIO 89 |
Introduction to Health Sciences Statistics |
This course aims to provide a firm grounding in the foundations of probability and statistics, with a focus on analyzing data from the health sciences. Students will learn how to read, interpret, and critically evaluate the statistics in medical and biological studies. The course also prepares students to be able to analyze their own data, guiding them on how to choose the correct statistical test, avoid common statistical pitfalls, and perform basic functions in R deducer. Cardinal Course certified by the Haas Center. |
Terms: Aut, Win | Units: 3 |
| MS&E 226 |
Fundamentals of Data Science: Prediction, Inference, Causality |
This course is about understanding "small data": these are datasets that allow interaction, visualization, exploration, and analysis on a local machine. The material provides an introduction to applied data analysis, with an emphasis on providing a conceptual framework for thinking about data from both statistical and machine learning perspectives. Topics will be drawn from the following list, depending on time constraints and class interest: approaches to data analysis: statistics (frequentist, Bayesian) and machine learning; binary classification; regression; bootstrapping; causal inference and experimental design; multiple hypothesis testing. Class lectures will be supplemented by data-driven problem sets and a project. Prerequisites: CME 100 or MATH 51; 120, 220 or STATS 116; experience with R at the level of CME/STATS 195 or equivalent. |
Terms: Aut | Units: 3 |
| STATS 32 |
Introduction to R for Undergraduates |
This short course runs for weeks one through five of the quarter. It is recommended for undergraduate students who want to use R in the humanities or social sciences and for students who want to learn the basics of R programming. The goal of the short course is to familiarize students with R's tools for data analysis. Lectures will be interactive with a focus on learning by example, and assignments will be application-driven. No prior programming experience is needed. Topics covered include basic data structures, File I/O, data transformation and visualization, simple statistical tests, etc, and some useful packages in R. Prerequisite: undergraduate student. Priority given to non-engineering students. Laptops necessary for use in class. |
Terms: Aut, Spr | Units: 1 |
| STATS 256 |
Modern Statistics for Modern Biology (BIOS 221, STATS 366) |
Application based course in nonparametric statistics. Modern toolbox of visualization and statistical methods for the analysis of data, examples drawn from immunology, microbiology, cancer research and ecology. Methods covered include multivariate methods (PCA and extensions), sparse representations (trees, networks, contingency tables) as well as nonparametric testing (Bootstrap, permutation and Monte Carlo methods). Hands on, use R and cover many Bioconductor packages. Prerequisite: Working knowledge of R and two core Biology courses. Note that the 155 offering is a writing intensive course for undergraduates only and requires instructor consent. (WIM). See https://web.stanford.edu/class/bios221/index.html |
Terms: Aut | Units: 3 |
| STATS 366 |
Modern Statistics for Modern Biology (BIOS 221, STATS 256) |
Application based course in nonparametric statistics. Modern toolbox of visualization and statistical methods for the analysis of data, examples drawn from immunology, microbiology, cancer research and ecology. Methods covered include multivariate methods (PCA and extensions), sparse representations (trees, networks, contingency tables) as well as nonparametric testing (Bootstrap, permutation and Monte Carlo methods). Hands on, use R and cover many Bioconductor packages. Prerequisite: Working knowledge of R and two core Biology courses. Note that the 155 offering is a writing intensive course for undergraduates only and requires instructor consent. (WIM). See https://web.stanford.edu/class/bios221/index.html |
Terms: Aut | Units: 3 |
